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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015931882.1_cds_XP_016478534.1_70166
CDS Infomation

[gene=LOC107799911] [db_xref=GeneID:107799911] [protein=long chain acyl-CoA synthetase 6, peroxisomal] [protein_id=XP_016478534.1] [location=complement(join(20551..20649,20795..20881,20996..21082,22495..22580,22656..22759,23022..23108,23201..23324,23557..23675,23797..23926,24110..24198,24278..24366,24668..24761,24847..24926,25053..25142,25715..25801,25905..25949,26767..26843,26919..27024,27315..27396,27493..27564,27879..27956,28168..28228,32800..32917))] [gbkey=CDS]
Sequence

ATGGAATCATCGGCAGAGCGACGTCTGAAAGCTATTCAAAACCATCTTGTTCCGGTCATC
GATGACCGGTCACTCTCATTCATCCGGTCAAACCCAACCGCCGGCGAATTTGTTCAAGGT
CAGGGTTTCAGCGTAGTTCTTCCTGAAAAATTGCAGACAGGAAAATGGAATGTGTACAGA
TCTGCACGATCTCCTCTGAAGCTTATTACTAGATTCCCTGATCATCCTGAAATTGCTACA
CTACATGATAACTTTGAACATGCAGTTCAAACCTATCAGGATTACAAATACTTGGGTACA
CGTATTCGGGTAGATGGAACTATTGGAGACTACAAATGGATGACATATGGAGAGGCAGGG
ACTGCTCGGACTGCAATTGGTTCTGGACTTCACTATTATGGATTGCAACCGGGTGCTCGC
GTGGGACTTTATTTCATAAATAGGCCTGAGTGGCTGATCGTAGACCATGCCTGCTCAGCG
TATTCATATTCTTCAGTCCCACTATATGACACTCTTGGTCCTGATGCTGTTAAATATATT
GTCAATCATGCTGATGTACAGGCCATTTTTTGTGTGCCTGGTACCTTGAACACGTTGTTG
ACCTTTTTATCGGAGATTCCTTCTGTACGTTTGATTGTGGTAGTGGGTGGGATAGATGAA
CATCTGCCATCTCTTCCATCTACAACGGGAATGAAGCTCTTATCATATACAAGGCTGCTG
AGTCAGGGCCGCAGCAGTATGCAACCCTTTTGCCCTCCCAAGCCTGAAGACATTGCTACC
ATATGCTATACAAGTGGTACTACGGGTACACCAAAGGGTGTCGTACTATCCCATGCGAAC
CTGATAGCAAGTGTTGCGGGCATGACCCTTTCCATCAAGTTTTATCCTTCTGACATATAC
ATATCCTATCTTCCTCTCGCGCACATCTATGAACGTGCCAACCAAATTACATCGGCATAT
TATGGTGTTGCTGTTGGCTTCTACCAAGGGGACAATCTGAAATTGATGGATGATTTGGCG
GCACTTAGACCTACAATATTTAGCAGTGTTCCTCGTCTGTACAACAGGATATATGCTGGG
ATCACAAATGCTGTACAAACTTCTGGCGTTCTGAAGCAGAGACTGTTCAATGCTGCCTAC
AACTCTAAGAAGCAAGCTGTCATGAATGGTAGAAAACCATCACCAATGTGGGATAGATTG
GTATTCAACAAAATAAAGGACAAACTGGGGGGGCGAGTTCGTCTTATGACCTCAGGTGCT
TCACCATTGTCGCCAGACGTGATGGAGTTCTTGAGAGTATGTTTTGGCTGTCTAGTAATG
GAAGGGTATGGCATGACTGAGACTTCATGTGTCATAAGCTCAATGGACGATAGTGATCTC
TTAACTGGTCATGTTGGTTCACCAAATCCTGCGTGTGAGATAAAACTCGTGGATGTTCCG
GAAATGAGTTACACATCAGAAGATCAGCCTCATCCTCGTGGAGAGATTTGTGTTAGAGGT
CCTATTATTTTTGAAGGCTATTACAAAGATGAAGTGCAGACGAGGGAGGTAATTGATGAA
GACGGGTGGCTGCATACTGGTGATATTGGATTATGGTTACCTGGAGGCCGCTTGAAGATT
ATTGATAGGAAGAAGAATATCTTCAAGTTGGCACAAGGTGAATACATAGCTCCTGAGAAA
ATTGAGAATGTTTATGCCAAATGCAAATTTGTTGCACAGTGCTTTGTCTATGGTGATAGC
TTTAATTCCTCTTTAGTAGCAGTGGTTTGTGTAGAGCCAGATGTCTTTAAGGAATGGGCA
TCATCTGAGGGAATCAAGTATGAAAGTTTGGGACAACTGTGTAATGATCCAAGAGCGAAG
GCTGCAGTTCTTGCTGAGATGGATGCTGTCGGAAGGGAAGCGCAGTTGAGAGGTTTCGAA
TTTGCAAAAGCTGTAACATTGGTTATCGAGCCTTTCACGATCGAAAATGGTCTGCTCACT
CCCACATTCAAGGTGAAGAGACCGCAGGCAAAGGCTTATTTTGCCAAAGCAATATCTGAT
ATGTATAATGAGCTTTCTACATCAGATCCAGCAGCCCAGAAATCGCTATGA

Peptide Sequence

PEP ID

XP_016478534.1
PEP Infomation

PREDICTED: long chain acyl-CoA synthetase 6, peroxisomal [Nicotiana tabacum]
Sequence

MESSAERRLKAIQNHLVPVIDDRSLSFIRSNPTAGEFVQGQGFSVVLPEKLQTGKWNVYR
SARSPLKLITRFPDHPEIATLHDNFEHAVQTYQDYKYLGTRIRVDGTIGDYKWMTYGEAG
TARTAIGSGLHYYGLQPGARVGLYFINRPEWLIVDHACSAYSYSSVPLYDTLGPDAVKYI
VNHADVQAIFCVPGTLNTLLTFLSEIPSVRLIVVVGGIDEHLPSLPSTTGMKLLSYTRLL
SQGRSSMQPFCPPKPEDIATICYTSGTTGTPKGVVLSHANLIASVAGMTLSIKFYPSDIY
ISYLPLAHIYERANQITSAYYGVAVGFYQGDNLKLMDDLAALRPTIFSSVPRLYNRIYAG
ITNAVQTSGVLKQRLFNAAYNSKKQAVMNGRKPSPMWDRLVFNKIKDKLGGRVRLMTSGA
SPLSPDVMEFLRVCFGCLVMEGYGMTETSCVISSMDDSDLLTGHVGSPNPACEIKLVDVP
EMSYTSEDQPHPRGEICVRGPIIFEGYYKDEVQTREVIDEDGWLHTGDIGLWLPGGRLKI
IDRKKNIFKLAQGEYIAPEKIENVYAKCKFVAQCFVYGDSFNSSLVAVVCVEPDVFKEWA
SSEGIKYESLGQLCNDPRAKAAVLAEMDAVGREAQLRGFEFAKAVTLVIEPFTIENGLLT
PTFKVKRPQAKAYFAKAISDMYNELSTSDPAAQKSL

Transcript Sequence

Gene sequence data has not been registered.